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Washington University Department of Biology

Collected Publications - 2011

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Faculty names are in bold type.

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  1. Allen GE. 2011. Eugenics and modern biology: critiques of eugenics, 1910-1945. Ann Hum Genet 75(3):314-25. PubMed abstract & fulltext for subscribers (officially access at WU is limited to medical campus).
  2. Alvarez S, Galant A, Jez JM, Hicks LM. 2011. Redox-regulatory mechanisms induced by oxidative stress in Brassica juncea roots monitored by 2-DE proteomics. Proteomics 11(7):1346-50. PubMed abstract & fulltext for subscribers.
  3. An S, Irwin RP, Allen CN, Tsai C, Herzog ED. 2011. Vasoactive intestinal polypeptide requires parallel changes in adenylate cyclase and phospholipase C to entrain circadian rhythms to a predictable phase. J Neurophysiol. 105(5):2289-96. PubMed abstract & fulltext for subscribers, freely available 1 year after publication.
  4. Anderson CD, Rosenberg MS. 2011. Variation in association with anthropogenic habitat edges exhibited by the timber rattlesnake (Crotalus horridus) in St. Louis County, Missouri. J Herpetology 45(1):50-55. Abstract & fulltext for BioOne 1 subscribers..
  5. Anderson MJ, Crist TO, Chase JM, Vellend M, Inouye BD, Freestone AL, Sanders NJ, Cornell HV, Comita LS, Davies KF, Harrison SP, Kraft NJ, Stegen JC, Swenson NG. 2011. Navigating the multiple meanings of Beta diversity: a roadmap for the practicing ecologist. Ecol Lett 14(1):19-28. PubMed abstract & fulltext for subscribers.
  6. Anderson WA, Amasino RM, Ares M Jr, Banerjee U, Bartel B, Corces VG, Drennan CL, Elgin SC, Epstein IR, Fanning E, Guillette LJ Jr, Handelsman J, Hatfull GF, Hoy RR, Kelley D, Leinwand LA, Losick R, Lu Y, Lynn DG, Neuhauser C, O'Dowd DK, Olivera T, Pevzner P, Richards-Kortum RR, Rine J, Sah RL, Strobel SA, Walker GC, Walt DR, Warner IM, Wessler S, Willard HF, Zare RN. 2011. Competencies: a cure for pre-med curriculum. Science 334(6057):760-1 PubMed citation & fulltext for subscribers.
  7. Anderson WA, Banerjee U, Drennan CL, Elgin SC, Epstein IR, Handelsman J, Hatfull GF, Losick R, O'Dowd DK, Olivera BM, Strobel SA, Walker GC, Warner IM. 2011. Science education. Changing the culture of science education at research universities. Science 331(6014):152-3. PubMed citation & fulltext for subscribers.
  8. Aponte JC, Jin Z, Vaisberg AJ, Castillo D, Málaga E, Lewis WH, Sauvain M, Gilman RH, Hammond GB. 2011. Cytotoxic and Anti-infective Phenolic Compounds Isolated from Mikania decora and Cremastosperma microcarpum. Planta Med 2011 Sep;77(14):1597-9. PubMed abstract & fulltext for subscribers [WU does not have online fulltext access].
  9. Aryal UK, Stockel J, Krovvidi R, Gritsenko MA, Monroe ME, Moore RJ, Koppenaal DW, Smith RD, Pakrasi HB, Jacobs JM. 2011. Dynamic proteomic profiling of a unicellular cyanobacterium Cyanothece ATCC51142 across light-dark diurnal cycles. BMC Syst Biol 5(1):194. PubMed abstract & open access fulltext.
  10. Bandyopadhyay A, Elvitigala T, Welsh E, Stöckel J, Liberton M, Min H, Sherman LA, Pakrasi HB. 2011. Novel metabolic attributes of the genus cyanothece, comprising a group of unicellular nitrogen-fixing cyanobacteria. MBio 2(5). pii: e00214-11. PubMed abstract & open access fulltext.
  11. Beaton LL, Van Zandt PA, Esselman EJ, Knight TM. 2011. Comparison of the herbivore defense and competitive ability of ancestral and modern genotypes of an invasive plant, Lespedeza cuneata. Oikos 120(9):1413–1419. Abstract & fulltext for subscribers.
  12. Beaulé C, Granados-Fuentes D, Marpegan L, Herzog ED. 2011. In vitro circadian rhythms: imaging and electrophysiology. Essays Biochem 49(1):103-17. PubMed abstract. [WU Chemistry library has this volume in paper].
  13. Bisht NC, Jez JM, Pandey S. 2011. An elaborate heterotrimeric G-protein family from soybean expands the diversity of plant G-protein networks. New Phytol 190(1):35-48. PubMed abstract & fulltext for subscribers.
  14. Blackman BK, Rasmussen DA, Strasburg JL, Raduski AR, Burke JM, Knapp SJ, Michaels SD, Rieseberg LH. 2011. Contributions of flowering time genes to sunflower domestication and improvement. Genetics 187(1):271-87. PubMed abstract & fulltext for subscribers; freely available 6 months after publication.
  15. Blankenship RE, Tiede DM, Barber J, Brudvig GW, Fleming G, Ghirardi M, Gunner MR, Junge W, Kramer DM, Melis A, Moore TA, Moser CC, Nocera DG, Nozik AJ, Ort DR, Parson WW, Prince RC, Sayre RT. 2011. Comparing photosynthetic and photovoltaic efficiencies and recognizing the potential for improvement. Science 332(6031):805-9. PubMed abstract & fulltext for subscribers.
  16. Bowman K, Husbands J, Rusek B, Schaal B. 2012. Views from the Field I: Encouraging Responsible Stewardship of the Life Sciences. pp. 145-154 IN Improving Implementation of the Biological Weapons Convention: The 2007–2010 Intersessional Process. United Nations Institute for Disarmament Research (UNIDIR). Abstract & freely available fulltext.
  17. Brotosudarmo TH, Collins AM, Gall A, Roszak AW, Gardiner AT, Blankenship RE, Cogdell RJ. 2011. The light intensity at which cells are grown controls the type of peripheral light-harvesting complexes that are assembled in a purple photosynthetic bacterium. Biochem J 440(1):51-61. PubMed abstract & freely available fulltext.
  18. Brudvig LA, Damschen EI. 2011. Land-use history, historical connectivity, and land management interact to determine longleaf pine woodland understory richness and composition. Ecography 34(2):257-266. Abstract & fulltext for subscribers.
  19. Burkle LA, Alarcon R. 2011. The future of plant–pollinator diversity: Understanding interaction networks across time, space, and global change. Amer J Botany 98(3):528-538. Abstract & fulltext for subscribers, freely available 12 months after publication.
  20. Burns JH, Ashman TL, Steets JA, Harmon-Threatt A, Knight TM. 2011. A phylogenetically controlled analysis of the roles of reproductive traits in plant invasions. Oecologia 166(4):1009-17. PubMed abstract & fulltext for subscribers.
  21. Cameron JC, Pakrasi HB. 2011. Glutathione facilitates antibiotic resistance and photosystem I stability during exposure to gentamicin in cyanobacteria. Appl Environ Microbiol 77(10):3547-50. PubMed abstract & fulltext for subscribers.
  22. Cameron JC, Pakrasi HB. 2011. Glutathione in Synechocystis 6803: A closer look into the physiology of a [delta]gshB mutant. Plant Signal Behav 6(1). PubMed abstract & fulltext for subscribers; freely available 6 months after publication.
  23. Carlson BA, Hasan SM, Hollmann M, Miller DB, Harmon LJ, Arnegard ME. 2011. Brain evolution triggers increased diversification of electric fishes. Science 332(6029):583-6. PubMed abstract & fulltext for subscribers.
  24. Carlson BA. 2011. Detection and generation of electric signals in fishes: An introduction. pp. 347-349. IN Encyclopedia of Fish Physiology: From Genome to Environment. Elsevier. Abstract & fulltext for subscribers [WU does not subscribe].
  25. Carlson BA, Arnegard ME. 2011. Neural innovations and the diversification of African weakly electric fishes. Commun Integr Biol 4(6):720-5. PubMed abstract & freely available fulltext.
  26. Chalker D, Yao MC. 2011. DNA Elimination in Ciliates: Transposon Domestication and Genome Surveillance. Annu Rev Genet 45:227-46. PubMed abstract & fulltext for subscribers.
  27. Chang SM, Gonzales E, Pardini E, Hamrick JL. 2011. Encounters of old foes on a new battle ground for an invasive tree, Albizia julibrissin Durazz (Fabaceae). Biological Invasions13(4):1043-1053. Abstract & fulltext for subscribers.
  28. Chase JM, Myers JA. 2011. Disentangling the importance of ecological niches from stochastic processes across scales. Philos Trans R Soc Lond B Biol Sci 366(1576):2351-63. PubMed abstract & fulltext for subscribers, freely available 1 year after publication.
  29. Chen M, Blankenship RE. 2011. Expanding the solar spectrum used by photosynthesis. Trends Plant Sci 16(8):427-31. PubMed abstract & fulltext for subscribers.
  30. Chung K, Tasaka M. 2011. RPT2a, a 26S proteasome AAA-ATPase, is directly involved in arabidopsis CC-NBS-LRR protein uni-1D-induced signaling pathways. Plant and Cell Physiology 52(9):1657-1664. Abstract & fulltext for subscribers.
  31. Collins AM, Kirmaier C, Holten D, Blankenship RE. 2011. Kinetics and energetics of electron transfer in reaction centers of the photosynthetic bacterium Roseiflexus castenholzii. Biochim Biophys Acta 1807(3):262-9. PubMed abstract & fulltext for subscribers.
  32. Conley AK, Watling JI, Orrock JL. 2011. Invasive plant alters ability to predict disease vector distribution. Ecol Appl 21(2):329-34. PubMed abstract & fulltext for subscribers.
  33. Craig MT, Orrock JL, Brudvig LA. 2011. Edge-mediated patterns of seed removal in experimentally connected and fragmented landscapes. Landscape Ecol 26(10):1373-1381. Abstract & fulltext for subscribers.
  34. Crone EE, Menges ES, Ellis MM, Bell T, Bierzychudek P, Ehrlén J, Kaye TN, Knight TM, Lesica P, Morris WF, Oostermeijer G, Quintana-Ascencio PF, Stanley A, Ticktin T, Valverde T, Williams JL. 2011. How do plant ecologists use matrix population models? Ecol Lett 14(1):1-8. PubMed abstract & fulltext for subscribers.
  35. Dai S, Wei X, Pei L, Thompson RL, Liu Y, Heard JE, Ruff TG, Beachy RN. 2011. BROTHER OF LUX ARRHYTHMO is a component of the Arabidopsis circadian clock. Plant Cell 23(3):961-72. PubMed abstract & fulltext for subscribers, freely available 12 months after publication.
  36. Egelhofer TA, Minoda A, Klugman S, Lee K, Kolasinska-Zwierz P, Alekseyenko AA, Cheung MS, Day DS, Gadel S, Gorchakov AA, Gu T, Kharchenko PV, Kuan S, Latorre I, Linder-Basso D, Luu Y, Ngo Q, Perry M, Rechtsteiner A, Riddle NC, Schwartz YB, Shanower GA, Vielle A, Ahringer J, Elgin SC, Kuroda MI, Pirrotta V, Ren B, Strome S, Park PJ, Karpen GH, Hawkins RD, Lieb JD. 2011. An assessment of histone-modification antibody quality. Nat Struct Mol Biol 18(1):91-3. PubMed abstract & fulltext for subscribers.
  37. Elvin-Lewis M. 2011. Dereplications can amplify the extent and worth of traditional pharmacopeias. Afr J Tradit Complement Altern Med 8(5 Suppl):13-26. PubMed abstract & freely available fulltext.
  38. Fass JN, Joshi NA, Couvillion MT, Bowen J, Gorovsky MA, Hamilton EP, Orias E, Hong K, Coyne RS, Eisen JA, Chalker DL, Lin D, Collins K. 2011. Genome-Scale Analysis of Programmed DNA Elimination Sites in Tetrahymena thermophila. G3 (Bethesda) 1(6):515-22. PubMed abstract & open access fulltext.
  39. Foster BL, Questad EJ, Collins CD, Murphy CA, Dickson TL, Smith VH. 2011. Seed availability constrains plant species sorting along a soil fertility gradient. J Ecol 99(2):473-481. Abstract & fulltext for subscribers.
  40. Freeman GM Jr, Herzog ED. 2011. Neuropeptides go the distance for circadian synchrony. Proc Natl Acad Sci U S A 108(34):13883-4. PubMed citation & fulltext for subscribers, freely available 6 months after publication.
  41. Gallant JR, Arnegard ME, Sullivan JP, Carlson BA, Hopkins CD. 2011. Signal variation and its morphological correlates in Paramormyrops kingsleyae provide insight into the evolution of electrogenic signal diversity in mormyrid electric fish. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 197(8):799-817. PubMed abstract & fulltext for subscribers.
  42. George AA, Macleod GT, Zakon HH. 2011. Calcium-dependent phosphorylation regulates neuronal stability and plasticity in a highly precise pacemaker nucleus. J Neurophysiol 106(1):319-31. PubMed abstract & fulltext for subscribers, freely available 1 year after publication.
  43. George AA, Lyons-Warren AM, Ma X, Carlson BA. 2011. A diversity of synaptic filters are created by temporal summation of excitation and inhibition. J Neurosci 31(41):14721-34. PubMed abstract & fulltext for subscribers, freely available 6 months after publication.
  44. Gonzalez BL, Radcliff M, Dorland E, Heyden R. 2011. Exploring interactivity, dimensionality and assessment in an animation prototype for visualizing molecular geometry and polarity. Abst Papers Amer Chem Soc 241: - 142-CHED.
  45. Goodson C, Roth R, Wang ZT, Goodenough U. 2011. Structural Correlates of Cytoplasmic and Chloroplast Lipid Body Synthesis in Chlamydomonas reinhardtii and Stimulation of Lipid-Body Production with Acetate-Boost. Eukaryot Cell 10(12):1592-606. PubMed abstract & fulltext for subscribers, freely available 6 months after publication.
  46. Granados-Fuentes D, Ben-Josef G, Perry G, Wilson DA, Sullivan-Wilson A, Herzog ED. 2011. Daily Rhythms in Olfactory Discrimination Depend on Clock Genes but Not the Suprachiasmatic Nucleus. J Biol Rhythms 26(6):552-560. Abstract & fulltext for subscribers.
  47. Gruhn JA, White PS. 2011. Magnolia grandiflora L. range expansion: A case study in a north carolina piedmont forest. Southeastern Naturalist 10(2):275-288. Abstract & fulltext for BioOne.1 subscribers.
  48. Gunn BF, Baudouin L, Olsen KM. 2011. Independent Origins of Cultivated Coconut (Cocos nucifera L.) in the Old World Tropics. PLoS One 6(6): e21143. Freely available fulltext | In the news.
  49. Guo Z, Lin S, Xin Y, Wang HY, Blankenship RE, Woodbury N. 2011. Comparing the Temperature Dependence of Photosynthetic Electron Transfer in Chloroflexus aurantiacus and Rhodobactor sphaeroides Reaction Centers. J Phys Chem B 115(38):11230-8. PubMed abstract & fulltext for subscribers.
  50. Hammond BG, Jez JM. 2011. Impact of food processing on the dietary risk assessment for proteins introduced into biotechnology-derived soybean and corn crops. Food Chem Toxicol 49(4):711-21. PubMed abstract & fulltext for subscribers.
  51. Harris DJ, Smith KG, Hanly PJ. 2011. Occupancy is nine-tenths of the law: occupancy rates determine the homogenizing and differentiating effects of exotic species. Am Nat 177(4):535-43. PubMed abstract & fulltext for subscribers.
  52. Haswell ES, Phillips R, Rees DC. 2011. Mechanosensitive channels: what can they do and how do they do it? Structure 19(10):1356-69. PubMed abstract & fulltext for subscribers, freely available 12 months after publication.
  53. Hayes D, Wen JZ, Panitchayangkoon G, Blankenship RE, Engel GS. 2011. Robustness of electronic coherence in the Fenna-Matthews-Olson complex to vibronic and structural modifications. Faraday Discussions 150:459-469. Abstract & fulltext for subscribers.
  54. He Y, Galant A, Pang Q, Strul JM, Balogun SF, Jez JM, Chen S. 2011. Structural and functional evolution of isopropylmalate dehydrogenases in leucine and glucosinolate pathways of Arabidopsis thaliana. J Biol Chem 286(33):28794-801. PubMed abstract & fulltext for subscribers; freely available 12 months after publication.
  55. Hoffer P, Ivashuta S, Pontes O, Vitins A, Pikaard C, Mroczka A, Wagner N, Voelker T. 2011. Posttranscriptional gene silencing in nuclei. Proc Natl Acad Sci U S A 108(1):409-14. PubMed abstract & fulltext for subscribers; freely available 6 months after publication.
  56. Hogenesch JB, Herzog ED. 2011. Intracellular and intercellular processes determine robustness of the circadian clock. FEBS Lett 585(10):1427-34. PubMed abstract & fulltext for subscribers; freely available 12 months after publication.
  57. Hohmann-Marriott MF, Blankenship RE. 2011. Evolution of Photosynthesis. Annu Rev Plant Biol 62:515-48. PubMed abstract & fulltext for subscribers.
  58. Inoue-Kashino N, Kashino Y, Orii H, Satoh K, Terashima I, Pakrasi HB. 2011. S4 Protein Sll1252 Is Necessary for Energy Balancing in Photosynthetic Electron Transport in Synechocystis sp. PCC 6803. Biochemistry 50(3):329-339. PubMed abstract & fulltext for subscribers, free 12 months after publication.
  59. Isaji M, Lenartowska M, Noguchi T, Frank DJ, Miller KG. 2011. Myosin VI Regulates Actin Structure Specialization through Conserved Cargo-Binding Domain Sites. PLoS One 6(8):e22755. PubMed abstract & freely available fulltext.
  60. Jez JM. 2011. Toward protein engineering for phytoremediation: Possibilities and challenges. Intl J Phytoremediation 13 (SUPPL.1):77-89. Abstract & fulltext for subscribers [WU does not subscribe].
  61. Kensinger BJ, Allan BF. 2011. Efficacy of dry ice-baited traps for sampling Amblyomma americanum (Acari: Ixodidae) varies with life stage but not habitat. J Med Entomol 48(3):708-711. Abstract & fulltext for BioOne subscribers.
  62. Kharchenko PV, Alekseyenko AA, Schwartz YB, Minoda A, Riddle NC, Ernst J, Sabo PJ, Larschan E, Gorchakov AA, Gu T, Linder-Basso D, Plachetka A, Shanower G, Tolstorukov MY, Luquette LJ, Xi R, Jung YL, Park RW, Bishop EP, Canfield TP, Sandstrom R, Thurman RE, Macalpine DM, Stamatoyannopoulos JA, Kellis M, Elgin SC, Kuroda MI, Pirrotta V, Karpen GH, Park PJ. 2011. Comprehensive analysis of the chromatin landscape in Drosophila melanogaster. Nature 471(7339):480-5. PubMed abstract & fulltext for subscribers.
  63. Knight TM, Havens K, Vitt P. 2011. Will the Use of Less Fecund Cultivars Reduce the Invasiveness of Perennial Plants? BioScience 61(10):816–822. Abstract & fulltext for BioOne subscribers | In the News, WU Record.
  64. Kraft NJ, Comita LS, Chase JM, Sanders NJ, Swenson NG, Crist TO, Stegen JC, Vellend M, Boyle B, Anderson MJ, Cornell HV, Davies KF, Freestone AL, Inouye BD, Harrison SP, Myers JA. 2011. Disentangling the drivers of ? diversity along latitudinal and elevational gradients. Science 333(6050):1755-8. PubMed abstract & fulltext for subscribers.
  65. Kranz RG. 2011. Cytochrome c biosynthetic pathways: Heme transport, redox control, and attachment. Abst Papers Amer Chem Soc 241: - 419-INOR.
  66. Kuzdzal-Fick JJ, Fox SA, Strassmann JE, Queller DC. 2011. High relatedness is necessary and sufficient to maintain multicellularity in Dictyostelium. Science 334(6062):1548-51. PubMed abstract & fulltext for subscribers.
  67. Larson CR, Seng CO, Lauman L, Matthies HJ, Wen J, Blankenship RE, Allen JP. 2011. The three-dimensional structure of the FMO protein from Pelodictyon phaeum and the implications for energy transfer. Photosynth Res 107(2):139-50. PubMed abstract & fulltext for subscribers.
  68. Lee SG, Jez JM. 2011. The phosphobase methylation pathway in caernorhabditis elegans: A new route to phospholipids in animals. Current Chemical Biology 5(3):183-188. Abstract & fulltext for subscribers [WU does not subscribe].
  69. Lee S, Jia Y, Jia M, Gealy DR, Olsen KM, Caicedo AL. 2011. Molecular Evolution of the Rice Blast Resistance Gene Pi-ta in Invasive Weedy Rice in the USA. PLoS One 6(10):e26260. PubMed abstract & open access fulltext.
  70. Lee SG, Haakenson W, McCarter JP, Williams DJ, Hresko MC, Jez JM. 2011. Thermodynamic evaluation of ligand binding in the plant-like phosphoethanolamine methyltransferases of the parasitic nematode haemonchus contortus. J Biol Chem 286(44):38060-8. PubMed abstract & fulltext for subscribers, freely available 1 year after publication.
  71. Liberton M, Austin JR 2nd, Berg RH, Pakrasi HB. 2011. Insights into the complex 3-D architecture of thylakoid membranes in unicellular cyanobacterium Cyanothece sp. ATCC 51142. Plant Signal Behav 6(4). PubMed abstract & fulltext for subscribers, freely available 6 months after publication.
  72. Liberton M, Austin JR, Berg RH, Pakrasi HB. 2011. Unique thylakoid membrane architecture of a unicellular N2-fixing cyanobacterium revealed by electron tomography. Plant Physiol 155(4):1656-1666. PubMed abstract & freely available fulltext.
  73. Liu H, Roose JL, Cameron JC, Pakrasi HB. 2011. A genetically tagged Psb27 protein allows purification of two consecutive PSII assembly intermediates in Synechocystis 6803, a cyanobacterium. J Biol Chem 286(28):24865-71. PubMed abstract & fulltext for subscribers, free 12 months after publication.
  74. Liu H, Huang RY, Chen J, Gross ML, Pakrasi HB. 2011. Psb27, a transiently associated protein, binds to the chlorophyll binding protein CP43 in photosystem II assembly intermediates. Proc Natl Acad Sci U S A 108(45):18536-41. PubMed abstract & fulltext for subscribers, free 6 months after publication.
  75. McDermott JE, Oehmen CS, McCue LA, Hill E, Choi DM, Stöckel J, Liberton M, Pakrasi HB, Sherman LA. 2011. A model of cyclic transcriptomic behavior in the cyanobacterium Cyanothece sp. ATCC 51142. Mol Biosyst 7(8):2407-18. PubMed abstract & fulltext for subscribers.
  76. Maksaev G, Haswell ES. 2011. Expression and characterization of the bacterial mechanosensitive channel MscS in Xenopus laevis oocytes. J Gen Physiol 138(6):641-9. PubMed abstract & fulltext for subscribers, free 6 months after publication.
  77. Marpegan L, Swanstrom AE, Chung K, Simon T, Haydon PG, Khan SK, Liu AC, Herzog ED, Beaulé C. 2011. Circadian regulation of ATP release in astrocytes. J Neurosci 31(23):8342-50. PubMed abstract & fulltext for subscribers, freely available 6 months after publication.
  78. Martínez-Andújar C, Ordiz MI, Huang Z, Nonogaki M, Beachy RN, Nonogaki H. 2011. Induction of 9-cis-epoxycarotenoid dioxygenase in Arabidopsis thaliana seeds enhances seed dormancy. Proc Natl Acad Sci U S A 108(41):17225-9. PubMed abstract & fulltext for subscribers, freely available 6 months after publication.
  79. Meeker K, Harang R, Webb AB, Welsh DK, Doyle FJ 3rd, Bonnet G, Herzog ED, Petzold LR. 2011. Wavelet measurement suggests cause of period instability in Mammalian circadian neurons. J Biol Rhythms 26(4):353-62. PubMed abstract & fulltext for subscribers.
  80. Mendez DL, Kim D, Chruszcz M, Stephens GE, Minor W, Khorasanizadeh S, Elgin SC. 2011. The HP1a Disordered C Terminus and Chromo Shadow Domain Cooperate to Select Target Peptide Partners. Chembiochem 12(7):1084-96. PubMed abstract & fulltext for subscribers.
  81. Mielke SP, Kiang NY, Blankenship RE, Gunner MR, Mauzerall D. 2011. Efficiency of photosynthesis in a Chl d-utilizing cyanobacterium is comparable to or higher than that in Chl a-utilizing oxygenic species. Biochim Biophys Acta 1807(9):1231-6. PubMed abstract & fulltext for subscribers.
  82. Miller SR, Wood AM, Blankenship RE, Kim M, Ferriera S. 2011. Dynamics of gene duplication in the genomes of chlorophyll d-producing cyanobacteria: Implications for the ecological niche. Genome Biol Evol 3:601-13. Pubmed abstract & freely available fulltext.
  83. Molina J, Sikora M, Garud N, Flowers JM, Rubinstein S, Reynolds A, Huang P, Jackson S, Schaal BA, Bustamante CD, Boyko AR, Purugganan MD. 2011. Molecular evidence for a single evolutionary origin of domesticated rice. Proc Natl Acad Sci U S A 108(20):8351-8356. PubMed abstract & fulltext for subscribers, freely available 6 months after publication | In the WU Record.
  84. Molina J, Sikora M, Garud N, Flowers JM, Rubinstein S, Reynolds A, Huang P, Jackson S, Schaal BA, Bustamante CD, Boyko AR, Purugganan MD. 2011. Reply to Ge and Sang: A single origin of domesticated rice. Proc Natl Acad Sci U S A 108(39):E756. Abstract & fulltext for subscribers, freely available 6 months after publication.
  85. Motl JA, Chalker DL. 2011. Zygotic Expression of the Double-Stranded RNA Binding Motif Protein, Drb2p, is required for DNA Elimination in the Ciliate, Tetrahymena thermophila. Eukaryot Cell 10(12):1648-59. PubMed abstract & fulltext for subscribers, freely available 6 months after publication.
  86. Myers JA, Harms KE. 2011. Seed arrival and ecological filters interact to assemble high-diversity plant communities. Ecology 92(3):676-686. Abstract & fulltext for subscribers.
  87. Ng IS, Tsai SW, Ju YM, Yu SM, Ho TH. 2011. Dynamic synergistic effect on Trichoderma reesei cellulases by novel ?-glucosidases from Taiwanese fungi. Bioresour Technol 102(10):6073-81. PubMed abstract & fulltext for subscribers.
  88. Niedzwiedzki DM, Fuciman M, Frank HA, Blankenship RE. 2011. Energy transfer in an LH4-like light harvesting complex from the aerobic purple photosynthetic bacterium Roseobacter denitrificans. Biochim Biophys Acta 1807(5):518-28. PubMed abstract & fulltext for subscribers.
  89. Niedzwiedzki DM, Kobayashi M, Blankenship RE. 2011. Triplet excited state spectra and dynamics of carotenoids from the thermophilic purple photosynthetic bacterium Thermochromatium tepidum. Photosynth Res 107(2):177-86. PubMed abstract & fulltext for subscribers.
  90. Niedzwiedzki DM, Fuciman M, Kobayashi M, Frank HA, Blankenship RE. 2011. Ultrafast time-resolved spectroscopy of the light-harvesting complex 2 (LH2) from the photosynthetic bacterium Thermochromatium tepidum. Photosynth Res 110(1):49-60. PubMed abstract & fulltext for subscribers.
  91. Oberle B, Esselman EJ. 2011. Fruit and Seed Characters Help Distinguish Southern Illinois Dodecatheon (Primulaceae) Species and Highlight Unusual Intergrading Populations. Rhodora 113(955):280-299. Abstract & fulltext for subscribers [WU does not subscribe].
  92. Oberle B, Schaal BA. 2011. Responses to historical climate change identify contemporary threats to diversity in Dodecatheon. Proc Natl Acad Sci U S A 108(14):5655-60. PubMed abstract & fulltext for subscribers, freely available 6 months after publication.
  93. Offerdahl EG, Balser T, Dirks C, Miller K, Momsen JL, Montplaisir L, Osgood M, Sirum K, Wenderoth MP, White B, Wood WB, Withers M, Wright R. 2011. Society for the Advancement of Biology Education Research (SABER) - meeting report. CBE Life Sci Educ 10(1):11-3. PubMed citation & freely available fulltext.
  94. Orrock JL, Allan BF, Drost CA. 2011. Biogeographic and Ecological Regulation of Disease: Prevalence of Sin Nombre Virus in Island Mice Is Related to Island Area, Precipitation, and Predator Richness. Amer Naturalist 177(5):691-697. Abstract & fulltext for subscribers.
  95. Pardini EA, Drake JM, Knight TM. 2011. On the utility of population models for invasive plant management: response to Evans and Davis. [letter] Ecol Appl 21(2):614-618. Fulltext for subscribers.
  96. Perroud PF, Cove DJ, Quatrano RS, McDaniel SF. 2011. An experimental method to facilitate the identification of hybrid sporophytes in the moss Physcomitrella patens using fluorescent tagged lines. New Phytol 191(1):301-6. PubMed abstract & fulltext for subscribers.
  97. Pope WH, Ferreira CM, Jacobs-Sera D, Benjamin RC, Davis AJ, DeJong RJ, Elgin SC, Guilfoile FR, Forsyth MH, Harris AD, Harvey SE, Hughes LE, Hynes PM, Jackson AS, Jalal MD, MacMurray EA, Manley CM, McDonough MJ, Mosier JL, Osterbann LJ, Rabinowitz HS, Rhyan CN, Russell DA, Saha MS, Shaffer CD, Simon SE, Sims EF, Tovar IG, Weisser EG, Wertz JT, Weston-Hafer KA, Williamson KE, Zhang B, Cresawn SG, Jain P, Piuri M, Jacobs WR Jr, Hendrix RW, Hatfull GF. 2011. Cluster K mycobacteriophages: insights into the evolutionary origins of mycobacteriophage TM4. PLoS One 6(10):e26750. PubMed abstract & open access fulltext.
  98. Pope WH, Jacobs-Sera D, Russell DA, Peebles CL, Al-Atrache Z, Alcoser TA, Alexander LM, Alfano MB, Alford ST, Amy NE, Anderson MD, Anderson AG, Ang AA, Ares M, Barber AJ, Barker LP, Barrett JM, Barshop WD, Bauerle CM, Bayles IM, Belfield KL, Best AA, Borjon A, Bowman CA, Boyer CA, Bradley KW, Bradley VA, Broadway LN, Budwal K, Busby KN, Campbell IW, Campbell AM, Carey A, Caruso SM, Chew RD, Cockburn CL, Cohen LB, Corajod JM, Cresawn SG, Davis KR, Deng L, Denver DR, Dixon BR, Ekram S, Elgin SC, Engelsen AE, English BE, Erb ML, Estrada C, Filliger LZ, Findley AM, Forbes L, Forsyth MH, Fox TM, Fritz MJ, Garcia R, George ZD, Georges AE, Gissendanner CR, Goff S, Goldstein R, Gordon KC, Green RD, Guerra SL, Guiney-Olsen KR, Guiza BG, Haghighat L, Hagopian GV, Harmon CJ, Harmson JS, Hartzog GA, Harvey SE, He S, He KJ, Healy KE, Higinbotham ER, Hildebrandt EN, Ho JH, Hogan GM, Hohenstein VG, Holz NA, Huang VJ, Hufford EL, Hynes PM, Jackson AS, Jansen EC, Jarvik J, Jasinto PG, Jordan TC, Kasza T, Katelyn MA, Kelsey JS, Kerrigan LA, Khaw D, Kim J, Knutter JZ, Ko CC, Larkin GV, Laroche JR, Latif A, Leuba KD, Leuba SI, Lewis LO, Loesser-Casey KE, Long CA, Lopez AJ, Lowery N, Lu TQ, Mac V, Masters IR, McCloud JJ, McDonough MJ, Medenbach AJ, Menon A, Miller R, Morgan BK, Ng PC, Nguyen E, Nguyen KT, Nguyen ET, Nicholson KM, Parnell LA, Peirce CE, Perz AM, Peterson LJ, Pferdehirt RE, Philip SV, Pogliano K, Pogliano J, Polley T, Puopolo EJ, Rabinowitz HS, Resiss MJ, Rhyan CN, Robinson YM, Rodriguez LL, Rose AC, Rubin JD, Ruby JA, Saha MS, Sandoz JW, Savitskaya J, Schipper DJ, Schnitzler CE, Schott AR, Segal JB, Shaffer CD, Sheldon KE, Shepard EM, Shepardson JW, Shroff MK, Simmons JM, Simms EF, Simpson BM, Sinclair KM, Sjoholm RL, Slette IJ, Spaulding BC, Straub CL, Stukey J, Sughrue T, Tang TY, Tatyana LM, Taylor SB, Taylor BJ, Temple LM, Thompson JV, Tokarz MP, Trapani SE, Troum AP, Tsay J, Tubbs AT, Walton JM, Wang DH, Wang H, Warner JR, Weisser EG, Wendler SC, Weston-Hafer KA, Whelan HM, Williamson KE, Willis AN, Wirtshafter HS, Wong TW, Wu P, Yang YJ, Yee BC, Zaidins DA, Zhang B, Zúniga MY, Hendrix RW, Hatfull GF. 2011. Expanding the diversity of mycobacteriophages: insights into genome architecture and evolution. PLoS One 6(1):e16329. PubMed abstract & freely available fulltext.
  99. Powell KI, Krakos KN, Knight TM. 2011. Comparing the reproductive success and pollination biology of an invasive plant to its rare and common native congeners: a case study in the genus Cirsium (Asteraceae). Biological Invasions 13(3):905-917.Abstract & fulltext for subscribers.
  100. Powell KI, Chase JM, Knight TM. 2011. A synthesis of plant invasion effects on biodiversity across spatial scales. Amer J Botany 98(3):539-548. Abstract & fulltext for subscribers, freely available 12 months after publication.
  101. Raven PH, Chase JM, Pires JC. 2011. Introduction to special issue on biodiversity. Amer J Botany 98(3):333-335. Fulltext for subscribers, freely available 12 months after publication.
  102. Reagon M, Thurber CS, Olsen KM, Jia Y, Caicedo AL. 2011. The long and the short of it: SD1 polymorphism and the evolution of growth trait divergence in U.S. weedy rice. Mol Ecol 20(18):3743-56. PubMed abstract & fulltext for subscribers.
  103. Reece JS, Bowen BW, Smith DG, Larson A. 2011. Comparative phylogeography of four Indo-Pacific moray eel species (Muraenidae) reveals comparable ocean-wide genetic connectivity despite five-fold differences in available adult habitat. Marine Ecology Progress Series 437:269-277. Abstract & fulltext for subscribers, freely available 5 years after publication [WU does not subscribe].
  104. Riddle NC, Minoda A, Kharchenko PV, Alekseyenko AA, Schwartz YB, Tolstorukov MY, Gorchakov AA, Jaffe JD, Kennedy C, Linder-Basso D, Peach SE, Shanower G, Zheng H, Kuroda MI, Pirrotta V, Park PJ, Elgin SC, Karpen GH. 2011. Plasticity in patterns of histone modifications and chromosomal proteins in Drosophila heterochromatin. Genome Res 21(2):147-63. PubMed abstract & freely available.
  105. Sadeghayobi E, Blake S, Wikelski M, Gibbs J, Mackie R, Cabrera F. 2011. Digesta retention time in the Galápagos tortoise (Chelonoidi nigra). Comp Biochem Physiol A Mol Integr Physiol 160(4):493-7. PubMed abstract & fulltext for subscribers.
  106. San Francisco B, Bretsnyder EC, Rodgers KR, Kranz RG. 2011. Heme ligand identification and redox properties of the cytochrome c synthetase, CcmF. Biochemistry 50(50):10974-85. PubMed abstract & fulltext for subscribers, freely available 12 months after publication.
  107. San Francisco B, Richard-Fogal CL, Bretsnyder E, Kranz RG. 2011. Heme transport, iron redox state, and attachment to cytochrome c in the system I cytochrome c maturation pathway. Abst Papers Amer Chem Soc 241: - 152-INOR
  108. Schuler MS, Sears MW, Angilletta MJ. 2011. Food consumption does not affect the preferred body temperature of Yarrow's spiny lizard (Sceloporus jarrovi). J Thermal Biol 36(2):112-115. Abstract & fulltext for subscribers.
  109. Schuler MS, Cooper BS, Storm JJ, Sears MW, Angilletta MJ Jr. 2011. Isopods Failed to Acclimate Their Thermal Sensitivity of Locomotor Performance during Predictable or Stochastic Cooling. PLoS One 6(6):e20905. PubMed abstract & freely available fulltext.
  110. Shin R, Jez JM, Basra A, Zhang B, Schachtman DP. 2011. 14-3-3 Proteins fine-tune plant nutrient metabolism. FEBS Lett 585(1):143-7. PubMed abstract & fulltext for subscribers, free 1 year after publication.
  111. Sinclair RJ, Dixit S, Burton H. 2011. Recognition memory for vibrotactile rhythms: an fMRI study in blind and sighted individuals. Somatosens Mot Res 28(3-4):48-62. PubMed abstract & fulltext for subscribers.
  112. Smith J. 2011. Distinguishing causes of virulence evolution: reply to Alizon & Michalakis. 2011. Evolution 65(12):3639–3641. Abstract & fulltext for subscribers.
  113. Stöckel J, Jacobs JM, Elvitigala TR, Liberton M, Welsh EA, Polpitiya AD, Gritsenko MA, Nicora CD, Koppenaal DW, Smith RD, Pakrasi HB. 2011. Diurnal rhythms result in significant changes in the cellular protein complement in the cyanobacterium cyanothece 51142. PLoS One 6(2):e16680. PubMed abstract & freely available fulltext.
  114. Sun F, Zhu C, Dixit R, Cavalli V. 2011. Sunday Driver/JIP3 binds kinesin heavy chain directly and enhances its motility. EMBO J 30(16):3416-29. PubMed abstract & fulltext for subscribers, free 1 year after publication.
  115. Tang KH, Tang YJ, Blankenship RE. 2011. Carbon metabolic pathways in phototrophic bacteria and their broader evolutionary implications. Front Microbiol 2:165. PubMed abstract & freely available fulltext.
  116. Tang KH, Barry K, Chertkov O, Dalin E, Han CS, Hauser LJ, Honchak BM, Karbach LE, Land ML, Lapidus A, Larimer FW, Mikhailova N, Pitluck S, Pierson BK, Blankenship RE. 2011. Complete Genome Sequence of the Filamentous Anoxygenic Phototrophic Bacterium Chloroflexus aurantiacus. BMC Genomics 12(1):334. PubMed abstract & freely available fulltext.
  117. Tang KH, Zhu L, Urban VS, Collins AM, Biswas P, Blankenship RE. 2011. Temperature and Ionic Strength Effects on the Chlorosome Light-Harvesting Antenna Complex. Langmuir 27(8):4816-28. PubMed abstract & fulltext for subscribers.
  118. Templeton AR. 2011. Hampton Lawrence Carson, 1914-2004: A Biographical Memoir. Biographical Memoirs of the National Academy of Sciences Freely available fulltext.
  119. Templeton AR, Brazeal H, Neuwald JL. 2011. The transition from isolated patches to a metapopulation in the eastern collared lizard in response to prescribed fires. Ecology 92(9):1736-1747. Abstract & fulltext for subscribers | In the News: WU Record.
  120. Tinkum KL, Marpegan L, White LS, Sun J, Herzog ED, Piwnica-Worms D, Piwnica-Worms H. 2011. Bioluminescence Imaging Captures the Expression and Dynamics of Endogenous p21 Promoter Activity in Living Mice and Intact Cells. Mol Cell Biol 31(18):3759-72. PubMed abstract & fulltext for subscribers, freely available 4 months after publication.
  121. Trumbo DR, Burgett AA, Knouft JH. 2011. Testing climate-based species distribution models with recent field surveys of pond-breeding amphibians in eastern Missouri. Canadian Journal of Zoology 89(11):1074-1083. Abstract & fulltext for subscribers.
  122. Umate P, Tuteja N. 2011. Genome-wide analysis of oxysterol binding proteins in Arabidopsis and rice. Plant Signal Behav 6(3) PubMed abstract & fulltext for subscribers, freely available 6 months after publication.
  123. Umate P. 2011. Oxysterol binding proteins (OSBPs) and their encoding genes in Arabidopsis and rice. Steroids 76(5):524-9. PubMed abstract & fulltext for subscribers.
  124. Vasalou C, Herzog ED, Henson MA. 2011. Multicellular model for intercellular synchronization in circadian neural networks. Biophys J 101(1):12-20. PubMed abstract & fulltext for subscribers, freely available 12 months after publication.
  125. Wang SH, Elgin SC. 2011. Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line. Proc Natl Acad Sci U S A 108(52):21164-9. PubMed abstract & fulltext for subscribers, freely available 6 months after publication.
  126. Wang W, Ghosh BJ, Pakrasi HB. 2011. Identification and Modeling of Genes with Diurnal Oscillations from Microarray Time Series Data. IEEE/ACM Transactions on Computational Biology and Bioinformatics 8(1), art. no. 4815207: pp. 108-121. Abstract & fulltext for subscribers.
  127. Wang Y, Yi H, Wang M, Yu O, Jez JM. 2011. Structural and Kinetic Analysis of the Unnatural Fusion Protein 4-Coumaroyl-CoA Ligase::Stilbene Synthase. J Am Chem Soc 133(51):20684-7. PubMed abstract & fulltext for subscribers.
  128. Watling JI, Hickman CR, Lee E, Wang K, Orrock JL. 2011. Extracts of the invasive shrub Lonicera maackii increase mortality and alter behavior of amphibian larvae. Oecologia 165(1):153-9. PubMed abstract & fulltext for subscribers.
  129. Watling JI, Nowakowski AJ, Donnelly MA, Orrock JL. 2011. Meta-analysis reveals the importance of matrix composition for animals in fragmented habitat. Global Ecology and Biogeography 20(2):209-217. Abstract & fulltext for subscribers.
  130. Wegener KM, Bennewitz S, Oelmüller R, Pakrasi HB. 2011. The Psb32 Protein Aids in Repairing Photodamaged Photosystem II in the Cyanobacterium Synechocystis 6803. Mol Plant 4(6):1052-61. PubMed abstract & fulltext for subscribers, freely available 1 year after publication.
  131. Wen J, Zhang H, Gross ML, Blankenship RE. 2011. Native electrospray mass spectrometry reveals the nature and stoichiometry of pigments in the FMO photosynthetic antenna protein. Biochemistry 50(17):3502-11. PubMed abstract & fulltext for subscribers.
  132. Wen J, Tsukatani Y, Cui W, Zhang H, Gross ML, Bryant DA, Blankenship RE. 2011. Structural model and spectroscopic characteristics of the FMO antenna protein from the aerobic chlorophototroph, Candidatus Chloracidobacterium thermophilum. Biochim Biophys Acta 1807(1):157-64. PubMed abstract & fulltext for subscribers.
  133. Wilson ME, Jensen GS, Haswell ES. 2011. Two Mechanosensitive Channel Homologs Influence Division Ring Placement in Arabidopsis Chloroplasts. Plant Cell 23(8):2939-49. PubMed abstract & fulltext for subscribers, free 12 months after publication | In the news, including the journal issue cover photo.
  134. Wu SZ, Ritchie JA, Pan AH, Quatrano RS, Bezanilla M. 2011. Myosin VIII Regulates Protonemal Patterning and Developmental Timing in the Moss Physcomitrella patens. Mol Plant 4(5):909-21. PubMed abstract & fulltext for subscribers, free 12 months after publication.
  135. Yang J, Chen F, Yu O, Beachy RN. 2011. Controlled silencing of 4-coumarate:CoA ligase alters lignocellulose composition without affecting stem growth. Plant Physiol Biochem 49(1):103-9. PubMed abstract & fulltext for subscribers.
  136. Yang J, Ordiz MI, Jaworski JG, Beachy RN. 2011. Induced accumulation of cuticular waxes enhances drought tolerance in Arabidopsis by changes in development of stomata. Plant Physiol Biochem 49(12):1448-55. PubMed abstract & fulltext for subscribers.
  137. Yang J, Ordiz MI, Semenyuk EG, Kelly B, Beachy RN. 2011. A safe and effective plant gene switch system for tissue-specific induction of gene expression in Arabidopsis thaliana and Brassica juncea. Transgenic Res 21(4):879-83. PubMed abstract & fulltext for subscribers.
  138. Yu G, Olsen KM, Schaal BA. 2011. Association between nonsynonymous mutations of starch synthase IIa and starch quality in rice (Oryza sativa). New Phytol 189(2):593-601. PubMed abstract & fulltext for subscribers.
  139. Yu G, Olsen KM, Schaal BA. 2011. Molecular evolution of the endosperm starch synthesis pathway genes in rice (Oryza sativa L.) and its wild ancestor, O. rufipogon L. Mol Biol Evol 28(1):659-71. PubMed abstract & fulltext for subscribers.
  140. Zhang H, Cui W, Wen J, Blankenship RE, Gross ML. 2011. Native Electrospray and Electron-Capture Dissociation FTICR Mass Spectrometry for Top-down Studies of Protein Assemblies. Anal Chem 83(14):5598-606. PubMed abstract & fulltext for subscribers.
  141. Zhang X, Wanda SY, Brenneman K, Kong W, Zhang X, Roland K, Curtiss R 3rd. 2011. Improving Salmonella vector with rec mutation to stabilize the DNA cargoes. BMC Microbiol 11:31. PubMed abstract & freely available fulltext.
  142. Zhu C, Dixit R. 2011. Single Molecule Analysis of the Arabidopsis FRA1 Kinesin Shows that It Is a Functional Motor Protein with Unusually High Processivity. Mol Plant 4(5):879-85. PubMed abstract & fulltext for subscribers, freely available 1 year after publication.